Literature References

1. Temperature-Sensitive Mutations in the Putative Herpes Simplex Virus Type 1 Terminase Subunits pUL15 and pUL33 Preclude Viral DNA Cleavage/Packaging and Interaction with pUL28 at the Nonpermissive Temperature
   Kui Yang, Alice P. W. Poon, Bernard Roizman, and Joel D. Baines
   J. Virol., Jan 2008; 82: 487 - 494.
    
2. Microbiological and molecular determination of mycobiota in fresh and ensiled maize silage
   M.A. Mansfield and G.A. Kuldau
   Mycologia, Mar 2007; 99: 269 - 278.
    
3. Soil Microbial Community Analysis using Terminal Restriction Fragment Length Polymorphisms
   Janice E. Thies
   Soil Sci. Soc. Am. J., Mar 2007; 71: 579 - 591.
    
4. Preliminary characterization of the normal microbiota of the human vulva using cultivation-independent methods
   Celeste J. Brown, Mayee Wong, Catherine C. Davis, Amita Kanti, Xia Zhou, and Larry J. Forney
   J. Med. Microbiol., Feb 2007; 56: 271 - 276.
    
5. Cigarette Smoking, CFH, APOE, ELOVL4, and Risk of Neovascular Age-Related Macular Degeneration
   Margaret M. DeAngelis, Fei Ji, Ivana K. Kim, Scott Adams, Antonio Capone, Jr, Jurg Ott, Joan W. Miller, and Thaddeus P. Dryja
   Arch Ophthalmol, Jan 2007; 125: 49 - 54.

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1. Repetitive-Sequenced-Based PCR using the DiversiLab System for Identification of Aspergillus species
   Dewey Hansen, Mimi Healy, Kristy Reece, Cheryl Smith, and Gail L. Woods
   J. Clin. Microbiol., Mar 2008; 10.1128/JCM.00956-07.
    
2. Temporal distribution of porcine circovirus 2 genogroups recovered from postweaning multisystemic wasting syndrome–affected and –nonaffected farms in ireland and Northern Ireland
   Gordon M. Allan, Francis McNeilly, Michael McMenamy, Irene McNair, Steven G. Krakowka, Sirje Timmusk, Dermot Walls, Maria Donnelly, Donal Minahin, John Ellis, Per Wallgren, and Caroline Fossum
   J Vet Diagn Invest, Nov 2007; 19: 668 - 673.
    
3. Extensive Methylation Is Associated with ?-Catenin Mutations in Hepatocellular Carcinoma: Evidence for Two Distinct Pathways of Human Hepatocarcinogenesis
   Naoshi Nishida, Takafumi Nishimura, Takeshi Nagasaka, Iwao Ikai, Goel Ajay, and C. Richard Boland
   Cancer Res., May 2007; 67: 4586 - 4594.
    
4. Arabidopsis primary microRNA processing proteins HYL1 and DCL1 define a nuclear body distinct from the Cajal body
   Liang Song, Meng-Hsuan Han, Joanna Lesicka, and Nina Fedoroff
   PNAS, Mar 2007; 104: 5437 - 5442.
    

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1. MSR1 variants and the risks of prostate cancer and benign prostatic hyperplasia: a population-based study in China
   Ann W. Hsing, Lori C. Sakoda, Jinbo Chen, Anand P. Chokkalingam, Isabel Sesterhenn, Yu-Tang Gao, Jianfeng Xu, and S.Lilly Zheng
   Carcinogenesis, Dec 2007; 28: 2530 - 2536.
    
2. Sequence-specific Interactions in the RNA-binding Domain ofEscherichia coli Transcription Termination Factor Rho
   T. Kevin Hitchens, Yiping Zhan, Lislott V. Richardson, John P. Richardson, and Gordon S. Rule
   J. Biol. Chem., Nov 2006; 281: 33697 - 33703.
    
3. Detection of Microcystin-Producing Cyanobacteria in Finnish Lakes with Genus-Specific Microcystin Synthetase Gene E (mcyE) PCR and Associations with Environmental Factors
   Anne Rantala, Pirjo Rajaniemi-Wacklin, Christina Lyra, Liisa Lepistö, Jukka Rintala, Joanna Mankiewicz-Boczek, and Kaarina Sivonen
   Appl. Envir. Microbiol., Sep 2006; 72: 6101 - 6110.
    
4. Benchmark for Evaluating the Quality of DNA Sequencing: Proposal from an International External Quality Assessment Scheme
   Simon J. Patton, Andrew J. Wallace, and Rob Elles
   Clin. Chem., Apr 2006; 52: 728 - 736.
    
5. Germ-Line Mutation of NKX3.1 Cosegregates with Hereditary Prostate Cancer and Alters the Homeodomain Structure and Function
   S. Lilly Zheng, Jeong-ho Ju, Bao-li Chang, Elizabeth Ortner, Jielin Sun, Sarah D. Isaacs, Jishang Sun, Kathy E. Wiley, Wennuan Liu, Micheas Zemedkun, Patrick C. Walsh, James Ferretti, James Gruschus, William B. Isaacs, Edward P. Gelmann, and Jianfeng Xu
   Cancer Res., Jan 2006; 66: 69 - 77.

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1. Identification of soluble protein fragments by gene fragmentation and genetic selection
   Michael R. Dyson, Rajika L. Perera, S. Paul Shadbolt, Lynn Biderman, Krystyna Bromek, Natalia V. Murzina, and John McCafferty
   Nucleic Acids Res., Apr 2008; 10.1093/nar/gkn151.
    
2. The RNA polymerase factory: a robotic in vitro assembly platform for high-throughput production of recombinant protein complexes
   Sven Nottebaum, Lin Tan, Dominika Trzaska, Hannah C. Carney, and Robert O. J. Weinzierl
   Nucleic Acids Res., Jan 2008; 36: 245 - 252.
3. Engineering stability into Escherichia coli secreted Fabs leads to increased functional expression
   Stephen J. Demarest, Gang Chen, Bruce E. Kimmel, David Gustafson, Jane Wu, Jared Salbato, John Poland, Marikka Elia, Xuqiu Tan, Ken Wong, Jay Short, and Geneviève Hansen
   Protein Eng. Des. Sel., Jul 2006; 19: 325 - 336.

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1. From the Cover: Combinatorial antibody libraries from survivors of the Turkish H5N1 avian influenza outbreak reveal virus neutralization strategies
   Arun K. Kashyap, John Steel, Ahmet F. Oner, Michael A. Dillon, Ryann E. Swale, Katherine M. Wall, Kimberly J. Perry, Aleksandr Faynboym, Mahmut Ilhan, Michael Horowitz, Lawrence Horowitz, Peter Palese, Ramesh R. Bhatt, and Richard A. Lerner
   PNAS, Apr 2008; 105: 5986 - 5991.
    
2. A high-resolution genetic signature of demographic and spatial expansion in epizootic rabies virus
   Roman Biek, J. Caroline Henderson, Lance A. Waller, Charles E. Rupprecht, and Leslie A. Real
   PNAS, May 2007; 104: 7993 - 7998.

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1. A method for preparing DNA sequencing templates using a DNA-binding microplate 
   Y. Yang, Haroun R. Hebron, Jun Hang 
   J Biomol Tech, July 2009; 20(3): 165-171

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Services

1. MBD-seq as a cost-effective approach for methylome-wide association studies: demonstration in 1500 case–control samples 
   Karolina A Aberg​‌, Joseph L McClay​‌, Srilaxmi Nerella​‌, Lin Y Xie​‌, Shaunna L Clark​‌, Alexandra D Hudson​‌, Jozsef Bukszár​‌, Daniel Adkins​‌, Swedish Schizophrenia Consortium​‌, Christina M Hultman​‌, Patrick F Sullivan​‌, Patrik KE Magnusson​‌ & Edwin JCG van den Oord​‌ 
   December 2012, Vol. 4, No. 6, Pages 605-621
2. Meeting Report from the Genomic Standards Consortium (GSC) Workshop 9 
   Tanja Davidsen, Ramana Madupu, Peter Sterk, Dawn Field, George Garrity, Jack Gilbert, Frank Oliver Glöckner, Lynette Hirschman, Eugene Kolker, Renzo Kottmann, Nikos Kyrpides, Folker Meyer, Norman Morrison, Lynn Schriml, Tatiana Tatusova, and John Wooley
   2010 December 31; 3(3): 216–224
3. The Cluster 1 Type VI Secretion System Is a Major Virulence Determinant in Burkholderia pseudomallei 
   Mary N. Burtnick, Paul J. Brett, Sarah V. Harding, Sarah A. Ngugi, Wilson J. Ribot, Narisara Chantratita, Angelo Scorpio, Timothy S. Milne, Rachel E. Dean, David L. Fritz, Sharon J. Peacock, Joanne L. Prior, Timothy P. Atkins and David DeShazer 
   April 2011 vol. 79 no. 4 1512-1525
4. Big Data Requires Big Solutions
   Kate Marusina 
   September 1, 2012, 32(15): 1, 34-40
5. Deep sequencing of short RNAs reveals novel microRNAs in minor salivary glands of patients with Sjögren’s syndrome
   M Tandon, A Gallo, S-I Jang, GG Illei, I Alevizos 
   March 2012, 18(2): 127-131
6. Draft Genome Sequence of the Quality Control Strain Enterococcus faecalis ATCC 29212 
   Eun Bae Kim, Lauren M. Kopit, Linda J. Harris and Maria L. Marco 
   November 2012 vol. 194 no. 21 6006-6007
7. Bacillus anthracis genome organization in light of whole transcriptome sequencing 
   Jeffrey Martin, Wenhan Zhu, Karla D Passalacqua, Nicholas Bergman and Mark Borodovsky
   April 29, 2010 BMC Bioinformatics 2010, 11(Suppl 3):S10

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